CDS
| Accession Number | TCMCG006C121716 |
| gbkey | CDS |
| Protein Id | XP_013641201.1 |
| Location | join(5005331..5005459,5005842..5005905,5006002..5007111,5007179..5007393,5007467..5007740,5007814..5007989,5008068..5008175,5008271..5008380,5008476..5008581,5008650..5008820,5008894..5009022,5009107..5009289,5009362..5009493,5009565..5009676,5009750..5009873,5009939..5010068) |
| Gene | LOC106346422 |
| GeneID | 106346422 |
| Organism | Brassica napus |
Protein
| Length | 1090aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013785747.2 |
| Definition | starch synthase 3, chloroplastic/amyloplastic-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | M |
| Description | galactosyltransferase activity |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01003 [VIEW IN KEGG] |
| KEGG_ko |
ko:K20854
[VIEW IN KEGG] ko:K20855 [VIEW IN KEGG] ko:K20856 [VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005794 [VIEW IN EMBL-EBI] GO:0012505 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAAATGTGTTGGCAGATACAGAGACCGGCGAGTCTCAGACTGGTGTTACATCAAAAGGGTCGGCTCAAGATCAATACTTGTATTGGTTTTCTCCATCCTCACCCCAAATCTTACTCCTTTTCCAGTCTTGCTTCGTTGGAAAGTCAATACAGCTCAAATGGGTTTCTGCATCAGATCACGGCAACTACAGATTTTTCAAGGAAGAAGCAAGGGAGAATGTCAGCTTCAGGGCCCAAAAGCTCAGCTCCAACAGGCTTTGGGCGACGAACAAGTGCTCAGAAGAAGAACGTTGAAAAAGATAGCAATGCAACTTCTACAGTAACAAATGAGGTTTTACGGATCAGTAACTTGCCAGAAGCTAAAGCGATTGTGGAGAATCAAAGTTCTGAAGTTTTTGGTGAGAGGAATGTGTTAGATAGGTCGGAAACTGAGGATGGAAGCAACCAGGTGGATAACAAAATAACTGAGGATGACGCTTTATTACAAGTTAAGATAAAAGCTGAAAGAGAGAATCTTCGTAGGAAGGAAATAGAAGCGCTTGCTGAGGAAACTTTGTTGAGAGGTGATAGAATGTTTGTATATCCTCTTACTGCGAAGCCTGATGAAGACATAGAAGTGTTTCTCAACATAACTCTATCAACTCTGAATAAAGAACCCGATGTTTTGATCATGGGGGCGTTCAACGACTGGAGATGGAAATCTTTCACGAGGATATTGGAAAAGACATGGATCAATGGAGATTGGTTGTCTTGTCTCGTCCATATCCCTAAAGAAGCATATAAGATTGACTTTGTGTTTTTCAATGGCCAAAGTGTTTATGACAACAATAACTCAAAAGATTTTATTATAGATATTAAAAATGGGATGGATAAAGTAGAGTTTGAGAATTTTCTTCTAGAAGAGAAGTGGAGAGAGCAAGAGAAGCTAGCTAAGGAAGAAGCTGAGAGGGAAAGGGAAGAGGAAGAGAAGAGAAGAATCGAAGCTCGGAAGGCTGCTATTGAAGCTGATAGAGCACAAGCAAAGGCGGAGACACAGAGGAGACGTGAAATGCTTCAACAGGCTCTTGAGAAAGCTGTAGTCTCGGCTAGGAATGTATGGTACATTGAGCCGAGCAATTTCAAAGGCGGAGATAGAGTGAAGCTATATTACAACAAAAGCTCTGGTCCTCTAGCTAATGCCAAAGAGATCTGGACACATGGAGGGTTTAATAATTGGGTTGATGGTTTATCTATCGCTGAAAAGCTTGTTGATGCTGAGCTTGAGGATGATTCAAAGAGTGGAGACTGGTGGTTCGCTGAAGTCATAGTGCCGGTCCGTGCTCTAGTCATTGACTGGGTCTTTGCTGATGGACCGCCTGAAGGAGCGTTTCTGTATGACAACAATAGTCGCCAAGATTTCCACGCACTTGTTCCTCTAACAACTCCAGAAGAAGTTTACTGGTCAGAGGAAGAAGATCTAATGTTTAGGAAACTTCAGGAGGAGAGGAGGTTAAAAGAGGAAGCTATGCGTGTCAAGATGGAGAAAACAGGTCGCTTGAAAGCCGAAACTAAGGAACGAACACTTAAAAAGTTTCTGCTTTCCCAGAAAGACGTGGTTTACACGGAGCCTCTAGAGATTCAAGCAGGAAGCTCTGTGACAGTTTTGTACAATCCTTCAAACACGGTTTTGAAAGGAAAGCCTGAGGTTTGGTTTAGAGGCTCTTTTAATCGTTGGACTCATCGCTTGGGTCCTTTGCCACCTCAGAAAATGGAAGCAGCAGATGATGGAAGCTCACACTTGAAGACTTCTGCTAAGGTCCCGTTGGATGCTTACATGATGGACTTTGTTTTCTCCGAGAAAGAAGATGGTGGAGTTTTTGATAACAAAGATGGTTTGGATTACCACTTACCTGTCGTGGGAGGTATTGCCAAGGAACCACCATTGCACATTGTTCATATTGCTGTTGAAATGGCACCCATTGCAAAGGTTGGAGGCTTAGGTGATGTGGTCACTAGTCTATCTCGCGCTGTTCAAGAACTAAACCATAATGTGGATATCATCTTTCCAAATTATGATTGCATAAAGTACAACTTTGTGAAGGACTTGCAGTTCAACAGAAGCTATCACTGGGGAGGTACAGAAATAAAAGTCTGGCATGGGAAGGTGGAAGGCGTTTCTGTTTACTTCTTAGATCCGCAAAACGGATTGTTTCAGAGAGGATGTGTTTACGGTTGCGCAGATGATGCAGGAAGATTTGGTTTCTTCTGTCATGCTGCTCTTGAATTTCTTCTTCAAGGAGGCTTTCATCCAGACATTCTTCACTGTCACGACTGGTCCAGTGCTCCAGTTTCATGGCTGTTCAAGGATCATTACACTCATTACGGTTTAGTTAAAACTCGCGTTGTCTTCACAATCCATAATCTGGAATTTGGGGCAGGTGCCATTGGTAAAGCCATGAAATTTTCAGATAAAGCGACTACGGTGTCACGAACGTATGCCAAGGAAGTAGCTGGAAACTCTGTGATATCTCCACATTTATACAAGTTCCACGGAATAGTAAACGGTATCGACCCTGATATATGGGATCCGTACAACGATAACTTCATACCCGTGCCTTATACTTCAGAGAACGTGTTAGAAGGCAAAAGAGCAGCAAAGGAAGAATTGCAAAAGAGGCTTGGACTAAAGAGTTCTGATCTTCCGTTAGTAGGGATTATTACGCGCTTAACTCACCAGAAAGGAATACATTTGATCAAACACGCTATTTGGCGTACCTTGGAACGCAATGGACAGGTTGTGTTGCTAGGTTCAGCTCCGGATCCTCGGATCCAAAATGATTTTGTGAACTTGGCTAACCAGTTGCATTCTACTCATGGGGACCGTGCTCGGCTTGTTCTAACCTACGATGAACCTCTTTCCCATTTGATATACGCAGGGGCTGACTTTATTCTTGTACCGTCGATATTTGAGCCGTGTGGACTGACACAGCTCATAGCCATGAGATACGGCTCTGTTCCTATCGTTAGAAAAACTGGAGGACTCTACGACACGGTTTTTGATGTGGACCATGATAAAGAAAGAGCACAAGCACAAGTTCTAGAACCTAACGGCTTCAGCTTCGACGGGGCTGATGCTCCTGGTGTGGACTATGCTCTCAATAGGGCGATATCAGCGTGGTATGATGGTAGAGAGTGGTTTAACTCACTGTGTAAGACGGTGATGGAGCAAGACTGGTCATGGAATCGTCCTGCGCTTGAGTACATTGAGCTCTATCACTCTGCACGCAAGTGA |
| Protein: MEMCWQIQRPASLRLVLHQKGRLKINTCIGFLHPHPKSYSFSSLASLESQYSSNGFLHQITATTDFSRKKQGRMSASGPKSSAPTGFGRRTSAQKKNVEKDSNATSTVTNEVLRISNLPEAKAIVENQSSEVFGERNVLDRSETEDGSNQVDNKITEDDALLQVKIKAERENLRRKEIEALAEETLLRGDRMFVYPLTAKPDEDIEVFLNITLSTLNKEPDVLIMGAFNDWRWKSFTRILEKTWINGDWLSCLVHIPKEAYKIDFVFFNGQSVYDNNNSKDFIIDIKNGMDKVEFENFLLEEKWREQEKLAKEEAEREREEEEKRRIEARKAAIEADRAQAKAETQRRREMLQQALEKAVVSARNVWYIEPSNFKGGDRVKLYYNKSSGPLANAKEIWTHGGFNNWVDGLSIAEKLVDAELEDDSKSGDWWFAEVIVPVRALVIDWVFADGPPEGAFLYDNNSRQDFHALVPLTTPEEVYWSEEEDLMFRKLQEERRLKEEAMRVKMEKTGRLKAETKERTLKKFLLSQKDVVYTEPLEIQAGSSVTVLYNPSNTVLKGKPEVWFRGSFNRWTHRLGPLPPQKMEAADDGSSHLKTSAKVPLDAYMMDFVFSEKEDGGVFDNKDGLDYHLPVVGGIAKEPPLHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIIFPNYDCIKYNFVKDLQFNRSYHWGGTEIKVWHGKVEGVSVYFLDPQNGLFQRGCVYGCADDAGRFGFFCHAALEFLLQGGFHPDILHCHDWSSAPVSWLFKDHYTHYGLVKTRVVFTIHNLEFGAGAIGKAMKFSDKATTVSRTYAKEVAGNSVISPHLYKFHGIVNGIDPDIWDPYNDNFIPVPYTSENVLEGKRAAKEELQKRLGLKSSDLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSTHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSVPIVRKTGGLYDTVFDVDHDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWNRPALEYIELYHSARK |